STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QMT0CASP C terminal-domain-containing protein. (701 aa)    
Predicted Functional Partners:
A0A5C3QRH5
GRIP domain-containing protein.
    
 
 0.843
A0A5C3Q5X0
Guanylate kinase.
    
 
 0.676
A0A5C3QUV2
VIR_N domain-containing protein.
    
   0.608
A0A5C3R055
Maintenance of telomere capping protein 1.
    
   0.608
A0A5C3QQ17
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.580
A0A5C3QKK1
Pre-mRNA processing factor 3-domain-containing protein.
   
  
 0.527
A0A5C3R349
Diphthine synthase.
      
 0.510
A0A5C3QRS1
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS5 family.
      
 0.506
A0A5C3QUV5
U3 small nucleolar RNA-associated protein 22.
      
 0.505
A0A5C3QAI3
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
      
 0.474
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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