STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
A0A5C3QPQ4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)    
Predicted Functional Partners:
A0A5C3QH39
60s acidic ribosomal protein-domain-containing protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
  
 0.996
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.996
A0A5C3QJS4
60S ribosomal protein L5.
  
 0.996
A0A5C3QMS5
Ribosomal protein L23/L15e core domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.996
A0A5C3QQC8
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.996
A0A5C3QQT0
Ribosomal protein S8e/ribosomal biogenesis NSA2.
   
 
 0.996
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.996
A0A5C3R4X4
60S ribosomal protein L35.
  
 0.996
A0A5C3R854
Ribosomal protein L24.
  
 0.996
A0A5C3QEJ3
Ribosomal protein L32e.
   
 0.994
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.