STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QQS6Pyridoxal phosphate-dependent transferase. (581 aa)    
Predicted Functional Partners:
A0A5C3QQB5
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.838
A0A5C3R7G8
PALP-domain-containing protein.
  
 0.812
A0A5C3QUV1
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.799
A0A5C3QUW3
Uncharacterized protein.
  
 0.799
A0A5C3Q6G4
Homoserine dehydrogenase.
  
 
 0.759
A0A5C3QXQ3
Meth_synt_2 domain-containing protein.
  
 
 0.758
A0A5C3R3I2
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.743
A0A5C3QSK5
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.738
A0A5C3QEQ0
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase.
  
 
 0.733
A0A5C3QV11
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase.
  
 
 0.733
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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