STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QR17WD_REPEATS_REGION domain-containing protein. (527 aa)    
Predicted Functional Partners:
A0A5C3QIU2
WD40 repeat-like protein.
    
 0.733
A0A5C3R7K9
B30.2/SPRY domain-containing protein.
    
 0.728
A0A5C3QR90
Uncharacterized protein.
    
 0.694
A0A5C3QQJ2
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.689
A0A5C3Q2I6
UBA domain-containing protein.
    
 0.668
A0A5C3QBL5
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.663
A0A5C3QUS0
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.662
A0A5C3QXN8
Nucleoporin.
    
 0.654
A0A5C3QK71
Nucleoporin Nup120/160-domain-containing protein.
    
 0.650
A0A5C3Q6W9
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.643
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.