STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QR54Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (260 aa)    
Predicted Functional Partners:
A0A5C3QP20
Thioredoxin-domain-containing protein.
   
 0.982
A0A5C3R0R4
Uncharacterized protein.
   
 0.959
A0A5C3QVJ9
RING-type domain-containing protein.
    
 0.957
A0A5C3R8A2
PRKCSH domain-containing protein.
    
 0.955
A0A5C3QGA4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.923
A0A5C3QJL0
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 0.923
A0A5C3QK22
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
  
 
0.918
A0A5C3QH47
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.897
A0A5C3R083
Ubiquitin fusion degradation protein UFD1-domain-containing protein.
   
 
 0.882
A0A5C3QDF0
Uncharacterized protein.
    
 0.877
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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