STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QRG5Vps53-like protein. (865 aa)    
Predicted Functional Partners:
A0A5C3QG12
Vps51/Vps67-domain-containing protein.
    
 0.980
A0A5C3QLQ2
Vps54-like protein-domain-containing protein.
   
 0.980
A0A5C3QXA2
Vacuolar sorting protein.
   
 0.970
A0A5C3QJM6
Ras family-domain-containing protein.
    
 0.871
A0A5C3QPS6
t-SNARE.
   
 0.826
A0A5C3QVX4
t-SNARE; Belongs to the syntaxin family.
    
 0.799
A0A5C3QWH6
Dor1-like family-domain-containing protein.
   
 
 0.786
A0A5C3QT36
t-SNARE coiled-coil homology domain-containing protein.
   
 0.783
A0A5C3QF94
Sec34-like family-domain-containing protein.
   
 
 0.778
A0A5C3R2J4
COG4 transport protein-domain-containing protein.
   
 
 0.775
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.