STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QRH3Glycosyl hydrolase catalytic core-domain-containing protein. (334 aa)    
Predicted Functional Partners:
A0A5C3QBQ0
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.764
A0A5C3QBJ0
Six-hairpin glycosidase.
   
  0.558
A0A5C3QR20
Endoglucanase.
   
  0.558
A0A5C3QL23
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.549
A0A5C3Q3T2
Uncharacterized protein.
    
   0.547
A0A5C3QFZ9
Mitochondrial ribosomal death-associated protein 3-domain-containing protein.
    
   0.547
A0A5C3QI78
Rab-GTPase-TBC domain-containing protein.
    
   0.547
A0A5C3QIJ1
Mitochondrial ribosomal subunit S27-domain-containing protein.
    
   0.547
A0A5C3QJA6
Mitochondrial 39-S ribosomal protein L47 (MRP-L47)-domain-containing protein.
    
   0.547
A0A5C3QRS1
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.547
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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