STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QSE6Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
A0A5C3QXX8
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
    
 0.728
A0A5C3QDU8
DNA polymerase.
   
 0.691
A0A5C3R0M8
Small nuclear ribonucleoprotein Sm D2.
    
 0.679
A0A5C3QDB2
Sm domain-containing protein.
    
  0.673
A0A5C3QZR7
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.672
A0A5C3QPT9
ERCC4 domain-containing protein.
    
 0.664
A0A5C3QU25
Uncharacterized protein.
    
  0.658
A0A5C3QG75
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.623
A0A5C3R0K7
Cupredoxin.
  
 
  0.619
A0A5C3QN39
Histone acetyltransferase type B subunit 2.
    
  0.608
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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