STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QT57tRNA-dihydrouridine synthase 2. (468 aa)    
Predicted Functional Partners:
A0A5C3Q0Y2
Prolyl-tRNA synthetase.
  
 
 0.787
A0A5C3QJ66
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.787
A0A5C3QPD6
Ribosome biogenesis protein BRX1.
   
    0.715
A0A5C3QCM8
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.674
A0A5C3R0U7
Pseudouridine synthase.
  
 
 0.596
A0A5C3QZS5
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
    0.590
A0A5C3Q1R6
Uncharacterized protein.
   
    0.579
A0A5C3QP45
Sas10 C-terminal domain-containing protein.
   
    0.579
A0A5C3QUX4
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.550
A0A5C3QUY4
FMN-linked oxidoreductase.
  
  
0.546
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.