STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QU49ARM repeat-containing protein. (1150 aa)    
Predicted Functional Partners:
A0A5C3QPM7
Smg-4/UPF3 family-domain-containing protein.
   
 0.996
A0A5C3QZ25
RNA helicase-domain-containing protein.
   
 0.994
A0A5C3R001
RRM domain-containing protein.
    
 0.993
A0A5C3QL19
RNP containing family member.
    
 0.986
A0A5C3Q0Y5
RNA-dependent RNA polymerase.
   
 0.955
A0A5C3QN23
AAA domain-containing protein.
   
 0.955
A0A5C3QRX9
PWI domain-containing protein.
    
 
 0.952
A0A5C3QP22
RRM domain-containing protein.
    
 0.931
A0A5C3QZK7
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 0.856
A0A5C3QJ95
HRDC domain-containing protein.
   
 
 0.846
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.