STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QUJ5RRM domain-containing protein. (449 aa)    
Predicted Functional Partners:
A0A5C3R073
ATP-dependent RNA helicase eIF4A.
 
 
 0.971
A0A5C3QN64
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.950
TIF32
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.943
A0A5C3Q462
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.936
A0A5C3QS25
Translation initiation factor 2, alpha subunit.
   
 0.926
PRT1
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 0.926
A0A5C3QWW2
Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.
   
 0.909
A0A5C3QLQ6
BTB domain-containing protein.
   
 0.907
A0A5C3R781
MI domain-containing protein.
   
 0.907
A0A5C3R791
Armadillo-type protein.
   
 0.907
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.