STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QVK5Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (370 aa)    
Predicted Functional Partners:
A0A5C3R141
UBX domain-containing protein.
    
 
 0.953
A0A5C3R083
Ubiquitin fusion degradation protein UFD1-domain-containing protein.
    
 
 0.939
A0A5C3QEU8
RING-type domain-containing protein.
    
 
 0.900
A0A5C3QWD5
Polyubiquitin-tagged protein recognition complex Npl4 component.
    
 
 0.881
A0A5C3QVJ9
RING-type domain-containing protein.
    
 
 0.771
A0A5C3Q719
EMC1_C domain-containing protein.
    
 
 0.595
A0A5C3R4G4
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.594
A0A5C3QUB6
TPR_REGION domain-containing protein.
    
 
 0.548
A0A5C3QGA4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.508
A0A5C3QH47
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.508
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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