STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QWB0Nucleoporin subcomplex protein binding to Pom34-domain-containing protein. (2054 aa)    
Predicted Functional Partners:
A0A5C3QEU9
Nuclear pore protein.
   
 0.995
A0A5C3Q6M8
Nucleoporin Nup186/Nup192/Nup205.
   
 0.988
A0A5C3QXN8
Nucleoporin.
   
 0.985
A0A5C3QFH8
Nucleoporin complex subunit 54-domain-containing protein.
    
 0.973
A0A5C3QQJ2
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.967
A0A5C3Q2Y9
Nucleoporin protein Ndc1-Nup-domain-containing protein.
    
 0.966
A0A5C3QUS0
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
  
 0.966
A0A5C3Q6W9
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.956
A0A5C3QS09
Nuclear pore complex assembly-domain-containing protein.
    
 0.951
A0A5C3QK71
Nucleoporin Nup120/160-domain-containing protein.
   
 0.950
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.