STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QXS3Secretory pathway protein Sec39-domain-containing protein. (1010 aa)    
Predicted Functional Partners:
A0A5C3QWF7
Dsl1_C domain-containing protein.
    
 0.996
A0A5C3R0R1
RINT-1 family protein.
    
 0.985
A0A5C3QWE2
t-SNARE coiled-coil homology domain-containing protein.
    
 0.979
A0A5C3QQA8
Uncharacterized protein.
    
 0.975
A0A5C3QE29
PH domain-containing protein.
    
 0.946
A0A5C3QPK8
Kinase-like domain-containing protein.
    
 0.946
A0A5C3R1Q5
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
 
      0.897
A0A5C3QEI9
Protein transporter SEC22; Belongs to the synaptobrevin family.
    
 0.891
A0A5C3Q0R7
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
  0.783
A0A5C3QE88
Vesicular-fusion protein SEC17.
    
 0.766
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.