STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QZB4Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (794 aa)    
Predicted Functional Partners:
A0A5C3QA66
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
 
 
0.960
A0A5C3Q2M9
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.958
A0A5C3QBY0
Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.958
A0A5C3QSH6
Citrate synthase; Belongs to the citrate synthase family.
  
 0.926
A0A5C3R3Q4
Citrate synthase; Belongs to the citrate synthase family.
  
 0.926
A0A5C3QMI0
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
0.895
A0A5C3QEI8
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.868
A0A5C3QMY6
Isocitrate lyase.
  
 0.855
A0A5C3R4M2
Mitochondrial NAD-dependent isocitrate dehydrogenase subunit 1.
  
 0.849
A0A5C3QXQ4
Isocitrate lyase.
  
 0.839
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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