STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3R034ARID domain-containing protein. (1141 aa)    
Predicted Functional Partners:
A0A5C3QJ73
WD40 repeat-like protein.
   
 0.676
A0A5C3QSR1
Ipi1_N domain-containing protein.
    
 0.653
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.622
A0A5C3QII9
Actinin-like protein.
    
 0.596
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.577
A0A5C3QAM9
CLP1_P domain-containing protein.
    
  0.575
A0A5C3QE01
Uncharacterized protein.
    
 0.575
A0A5C3QP79
Las1-like-domain-containing protein.
    
  0.574
A0A5C3Q632
Uncharacterized protein.
    
  0.563
A0A5C3QEU4
Mitochondrial ribosomal protein subunit L2.
    
  0.561
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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