STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3R0J3GATA-type domain-containing protein. (127 aa)    
Predicted Functional Partners:
A0A5C3Q632
Uncharacterized protein.
    
 0.687
A0A5C3QCS3
Histone H2A; Belongs to the histone H2A family.
    
 0.639
A0A5C3QUW0
Ubiquitin carboxyl-terminal hydrolase.
    
  0.617
A0A5C3QKI1
Uncharacterized protein.
    
 0.601
A0A5C3R0I1
BTB domain-containing protein.
    
 0.601
A0A5C3R3L9
Transcription factor TFIID-domain-containing protein.
    
 0.601
A0A5C3QR90
Uncharacterized protein.
    
  0.593
A0A5C3QGL8
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.588
A0A5C3QNC2
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.588
A0A5C3QX07
Uncharacterized protein.
    
  0.569
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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