STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3R1P7Uncharacterized protein. (534 aa)    
Predicted Functional Partners:
A0A5C3QY86
Uncharacterized protein.
    
 0.719
A0A5C3QCK5
Uncharacterized protein.
    
 0.704
A0A5C3QWB4
Uncharacterized protein.
    
  0.696
A0A5C3QZM0
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.685
A0A5C3QYB2
SNF2 family N-terminal domain-containing protein.
    
 0.684
A0A5C3QZP8
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
   
  0.684
A0A5C3QK74
Ribosomal protein S9/S16-domain-containing protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.683
A0A5C3QSK4
Uncharacterized protein.
    
  0.683
A0A5C3QZE9
Ribosomal protein S16.
   
  0.682
A0A5C3Q5U2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.678
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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