STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR13280.1Methyltransferase domain-containing protein. (281 aa)    
Predicted Functional Partners:
SDR28480.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
 0.762
SDR28466.1
Acyl transferase domain-containing protein.
   
 0.703
SDR62468.1
Acyl transferase domain-containing protein.
   
 0.703
SDR41438.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.619
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 
 0.587
SDR60397.1
Adenylylsulfate kinase.
  
 
 0.587
SDQ92749.1
N-methylglutamate dehydrogenase subunit C.
     
 0.539
SDR27211.1
Sarcosine oxidase subunit alpha.
     
 0.539
SDR51300.1
Sarcosine oxidase subunit alpha.
     
 0.539
SDR53553.1
S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase.
    
 0.526
Your Current Organism:
Rhizobiales bacterium GAS113
NCBI taxonomy Id: 1884352
Other names: R. bacterium GAS113
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