STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR44517.1Transposase. (188 aa)    
Predicted Functional Partners:
SDR44523.1
Transposase.
 
     0.948
SDR44441.1
Transposase.
 
     0.779
SDR44529.1
Hypothetical protein.
       0.571
SDR49837.1
Transposase, IS4 family.
  
     0.444
SDR43919.1
Putative transposase.
  
     0.429
SDR64059.1
Transposase.
  
     0.425
SDR49798.1
Transposase.
  
     0.419
SDR64030.1
Transposase.
  
     0.418
SDR63699.1
Transposase, IS4 family.
  
     0.417
SDR64037.1
Transposase.
  
     0.417
Your Current Organism:
Rhizobiales bacterium GAS113
NCBI taxonomy Id: 1884352
Other names: R. bacterium GAS113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.