STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR49399.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
SDR56509.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.736
SDR48576.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.699
SDR53957.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.662
SDR54384.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.620
SDR45147.1
DNA-binding transcriptional regulator, LysR family; Manually curated; Belongs to the LysR transcriptional regulatory family.
  
     0.612
SDR42651.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.594
SDQ92118.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.577
SDR57062.1
LysR family transcriptional regulator, hca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.556
SDR45572.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.539
SDR49392.1
Predicted oxidoreductase.
       0.535
Your Current Organism:
Rhizobiales bacterium GAS113
NCBI taxonomy Id: 1884352
Other names: R. bacterium GAS113
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.