STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR55566.1TRAP-type C4-dicarboxylate transport system, substrate-binding protein. (347 aa)    
Predicted Functional Partners:
SDR55559.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.956
SDR53498.1
TRAP transporter, DctM subunit.
 
 
 0.931
SDR55555.1
TRAP transporter, DctM subunit.
 
 
 0.919
SDR54035.1
TRAP transporter, DctM subunit.
 
 
 0.854
SDR54029.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.840
SDQ94680.1
C4-dicarboxylate transporter, DctM subunit.
 
 
 0.839
SDR40056.1
TRAP transporter, DctM subunit.
 
 
 0.835
SDR12325.1
TRAP transporter, DctM subunit.
 
 
 0.821
SDR12299.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.763
SDR40067.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.739
Your Current Organism:
Rhizobiales bacterium GAS113
NCBI taxonomy Id: 1884352
Other names: R. bacterium GAS113
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