STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR57050.1Sortilin, neurotensin receptor 3. (1059 aa)    
Predicted Functional Partners:
SDR36841.1
Cyclohexadieny/prephenate dehydrogenase.
     
 0.606
SDR36761.1
Glycosyl transferase family 2.
  
     0.545
SDR57052.1
Hypothetical protein.
       0.470
SDR36024.1
TolB amino-terminal domain-containing protein.
 
     0.469
SDR28616.1
Hypothetical protein.
  
  
 0.464
SDR27310.1
Mannose-6-phosphate isomerase, cupin superfamily.
  
     0.458
SDR36782.1
Protein of unknown function.
  
     0.458
SDR61303.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
  
 0.442
SDR27610.1
Uncharacterized membrane protein.
  
     0.410
Your Current Organism:
Rhizobiales bacterium GAS113
NCBI taxonomy Id: 1884352
Other names: R. bacterium GAS113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.