STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR57749.1Taurine dioxygenase. (288 aa)    
Predicted Functional Partners:
tauB
Taurine transport system ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
 
 0.914
SDR17691.1
Taurine transport system substrate-binding protein.
 
 
 0.893
SDR34675.1
Sulfonate transport system permease protein.
 
 
 0.724
SDR57741.1
Protein of unknown function.
 
     0.723
SDR57746.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
  
    0.721
SDR32936.1
NitT/TauT family transport system substrate-binding protein.
  
 
 0.715
SDR57744.1
5-formyltetrahydrofolate cyclo-ligase.
       0.714
SDR57420.1
NitT/TauT family transport system permease protein.
 
 
 0.698
SDR34368.1
NitT/TauT family transport system permease protein.
 
 
 0.695
SDR52425.1
Hypothetical protein.
  
  
  0.683
Your Current Organism:
Rhizobiales bacterium GAS113
NCBI taxonomy Id: 1884352
Other names: R. bacterium GAS113
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