STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF78294.1Hypothetical protein; Belongs to the UPF0235 family. (92 aa)    
Predicted Functional Partners:
SFF78318.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.790
SFF78338.1
Porphobilinogen synthase; Belongs to the ALAD family.
       0.790
SFF78306.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
       0.789
SFF86757.1
Hypothetical protein.
  
     0.562
SFF90855.1
Cytochrome c oxidase cbb3-type subunit 4.
  
     0.537
SFF78350.1
Peptidase family M23.
       0.528
SFF87013.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.524
SFG53135.1
AAA domain-containing protein.
  
     0.469
SFF99392.1
GAF domain-containing protein.
  
     0.432
SFG17011.1
YggT family protein.
  
  
 0.432
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.