STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF83825.1Protein of unknown function. (123 aa)    
Predicted Functional Partners:
SFF83837.1
Serine O-acetyltransferase.
       0.812
SFF94063.1
Hypothetical protein.
  
     0.765
SFG30328.1
GcrA cell cycle regulator.
  
     0.740
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.721
SFG01754.1
Heat shock protein HspQ.
 
     0.696
SFF86964.1
Cell wall hydrolase CwlJ, involved in spore germination.
  
     0.681
SFF83869.1
Hypothetical protein.
 
     0.650
SFF78021.1
Ribonuclease T2; Belongs to the RNase T2 family.
  
    0.649
SFG03767.1
DnaJ domain-containing protein.
  
     0.649
SFG22591.1
Lipopolysaccharide export system protein LptA.
  
     0.646
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.