Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF83197.1 | SFF83230.1 | SAMN05518801_10266 | SAMN05518801_10268 | Thiol-disulfide isomerase or thioredoxin. | Hypothetical protein. | 0.704 |
SFF83197.1 | SFF83269.1 | SAMN05518801_10266 | SAMN05518801_10270 | Thiol-disulfide isomerase or thioredoxin. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.593 |
SFF83197.1 | SFF83322.1 | SAMN05518801_10266 | SAMN05518801_10273 | Thiol-disulfide isomerase or thioredoxin. | Hypothetical protein. | 0.495 |
SFF83197.1 | argH | SAMN05518801_10266 | SAMN05518801_10267 | Thiol-disulfide isomerase or thioredoxin. | Argininosuccinate lyase. | 0.710 |
SFF83197.1 | lysA | SAMN05518801_10266 | SAMN05518801_10269 | Thiol-disulfide isomerase or thioredoxin. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.704 |
SFF83230.1 | SFF83197.1 | SAMN05518801_10268 | SAMN05518801_10266 | Hypothetical protein. | Thiol-disulfide isomerase or thioredoxin. | 0.704 |
SFF83230.1 | SFF83269.1 | SAMN05518801_10268 | SAMN05518801_10270 | Hypothetical protein. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.741 |
SFF83230.1 | SFF83283.1 | SAMN05518801_10268 | SAMN05518801_10271 | Hypothetical protein. | Hypothetical protein. | 0.420 |
SFF83230.1 | SFF83302.1 | SAMN05518801_10268 | SAMN05518801_10272 | Hypothetical protein. | Hypothetical protein. | 0.413 |
SFF83230.1 | SFF83322.1 | SAMN05518801_10268 | SAMN05518801_10273 | Hypothetical protein. | Hypothetical protein. | 0.413 |
SFF83230.1 | argH | SAMN05518801_10268 | SAMN05518801_10267 | Hypothetical protein. | Argininosuccinate lyase. | 0.852 |
SFF83230.1 | lysA | SAMN05518801_10268 | SAMN05518801_10269 | Hypothetical protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.841 |
SFF83269.1 | SFF83197.1 | SAMN05518801_10270 | SAMN05518801_10266 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Thiol-disulfide isomerase or thioredoxin. | 0.593 |
SFF83269.1 | SFF83230.1 | SAMN05518801_10270 | SAMN05518801_10268 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Hypothetical protein. | 0.741 |
SFF83269.1 | SFF83283.1 | SAMN05518801_10270 | SAMN05518801_10271 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Hypothetical protein. | 0.465 |
SFF83269.1 | SFF83302.1 | SAMN05518801_10270 | SAMN05518801_10272 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Hypothetical protein. | 0.463 |
SFF83269.1 | SFF83322.1 | SAMN05518801_10270 | SAMN05518801_10273 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Hypothetical protein. | 0.475 |
SFF83269.1 | argH | SAMN05518801_10270 | SAMN05518801_10267 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Argininosuccinate lyase. | 0.741 |
SFF83269.1 | lysA | SAMN05518801_10270 | SAMN05518801_10269 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.739 |
SFF83283.1 | SFF83230.1 | SAMN05518801_10271 | SAMN05518801_10268 | Hypothetical protein. | Hypothetical protein. | 0.420 |
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