STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF96698.17-alpha-hydroxysteroid dehydrogenase. (261 aa)    
Predicted Functional Partners:
SFF96580.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.780
SFG44198.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.772
SFF77284.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.771
SFG16754.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.745
SFF91024.1
Glutamate synthase (NADH) large subunit.
     
 0.647
SFF96682.1
3-hydroxypropanoate dehydrogenase.
  
   0.594
SFF72809.1
Phosphocarrier protein HPr.
     
 0.557
SFF96673.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    
0.527
SFF73289.1
3-hydroxyacyl-CoA dehydrogenase.
  
  0.524
SFF96718.1
Transcriptional regulator, TetR family.
       0.515
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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