STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG00418.1Phenylpropionate dioxygenase, large terminal subunit. (440 aa)    
Predicted Functional Partners:
SFG00442.1
L-glutamine synthetase.
 
     0.910
SFF79001.1
L-glutamine synthetase.
 
     0.610
SFG00402.1
Hypothetical protein; Belongs to the LOG family.
       0.457
SFF93859.1
Hypothetical protein.
  
     0.443
SFF91125.1
Gentisate 1,2-dioxygenase.
  
     0.438
SFF96427.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
  
  0.405
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.