STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG01865.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
SFG01854.1
Type IV secretion system protein VirD4.
 
     0.946
SFG01887.1
Type IV secretion system protein VirB2.
 
     0.946
SFG01898.1
Type IV secretion system protein VirB3.
 
     0.946
SFG01912.1
Type IV secretion system protein VirB4.
 
     0.946
SFG01923.1
P-type conjugative transfer protein TrbJ.
 
     0.946
SFG01877.1
Type IV secretion system protein VirB11.
 
     0.929
SFG01933.1
Type IV secretion system protein TrbL.
 
     0.885
SFG01949.1
Type IV secretion system protein VirB5.
 
     0.877
SFG01963.1
Type IV secretion system protein VirB9.
 
     0.877
SFG01970.1
Type IV secretion system protein VirB10.
 
     0.877
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.