STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF98903.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
SFG54321.1
PAS domain S-box-containing protein.
  
 0.984
SFG03517.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.971
SFF76881.1
Response regulator receiver modulated diguanylate cyclase.
  
 0.958
SFG31021.1
Signal transduction histidine kinase.
  
 0.923
SFG40012.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 
 0.868
SFG25402.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.856
SFG33711.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
  
 0.850
SFF75969.1
Flagellar protein FlgJ.
   
    0.802
SFF90564.1
Diguanylate cyclase with GAF sensor.
  
 
 0.776
SFG13591.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
    
 0.768
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.