Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF77907.1 | SFG04414.1 | SAMN05518801_101457 | SAMN05518801_10684 | C-5 sterol desaturase. | Outer membrane protein. | 0.444 |
SFF85260.1 | SFF91896.1 | SAMN05518801_102203 | SAMN05518801_103177 | Acyltransferase family protein. | Cellulose biosynthesis protein BcsQ. | 0.756 |
SFF85260.1 | SFF91913.1 | SAMN05518801_102203 | SAMN05518801_103179 | Acyltransferase family protein. | Flp pilus assembly protein TadD, contains TPR repeats. | 0.760 |
SFF85260.1 | SFG04414.1 | SAMN05518801_102203 | SAMN05518801_10684 | Acyltransferase family protein. | Outer membrane protein. | 0.533 |
SFF85260.1 | SFG27540.1 | SAMN05518801_102203 | SAMN05518801_11346 | Acyltransferase family protein. | Sulfotransferase family protein. | 0.774 |
SFF91896.1 | SFF85260.1 | SAMN05518801_103177 | SAMN05518801_102203 | Cellulose biosynthesis protein BcsQ. | Acyltransferase family protein. | 0.756 |
SFF91896.1 | SFF91913.1 | SAMN05518801_103177 | SAMN05518801_103179 | Cellulose biosynthesis protein BcsQ. | Flp pilus assembly protein TadD, contains TPR repeats. | 0.956 |
SFF91896.1 | SFG04414.1 | SAMN05518801_103177 | SAMN05518801_10684 | Cellulose biosynthesis protein BcsQ. | Outer membrane protein. | 0.501 |
SFF91896.1 | SFG27540.1 | SAMN05518801_103177 | SAMN05518801_11346 | Cellulose biosynthesis protein BcsQ. | Sulfotransferase family protein. | 0.734 |
SFF91913.1 | SFF85260.1 | SAMN05518801_103179 | SAMN05518801_102203 | Flp pilus assembly protein TadD, contains TPR repeats. | Acyltransferase family protein. | 0.760 |
SFF91913.1 | SFF91896.1 | SAMN05518801_103179 | SAMN05518801_103177 | Flp pilus assembly protein TadD, contains TPR repeats. | Cellulose biosynthesis protein BcsQ. | 0.956 |
SFF91913.1 | SFG04414.1 | SAMN05518801_103179 | SAMN05518801_10684 | Flp pilus assembly protein TadD, contains TPR repeats. | Outer membrane protein. | 0.505 |
SFF91913.1 | SFG27540.1 | SAMN05518801_103179 | SAMN05518801_11346 | Flp pilus assembly protein TadD, contains TPR repeats. | Sulfotransferase family protein. | 0.747 |
SFG04407.1 | SFG04414.1 | SAMN05518801_10683 | SAMN05518801_10684 | Protein of unknown function. | Outer membrane protein. | 0.459 |
SFG04414.1 | SFF77907.1 | SAMN05518801_10684 | SAMN05518801_101457 | Outer membrane protein. | C-5 sterol desaturase. | 0.444 |
SFG04414.1 | SFF85260.1 | SAMN05518801_10684 | SAMN05518801_102203 | Outer membrane protein. | Acyltransferase family protein. | 0.533 |
SFG04414.1 | SFF91896.1 | SAMN05518801_10684 | SAMN05518801_103177 | Outer membrane protein. | Cellulose biosynthesis protein BcsQ. | 0.501 |
SFG04414.1 | SFF91913.1 | SAMN05518801_10684 | SAMN05518801_103179 | Outer membrane protein. | Flp pilus assembly protein TadD, contains TPR repeats. | 0.505 |
SFG04414.1 | SFG04407.1 | SAMN05518801_10684 | SAMN05518801_10683 | Outer membrane protein. | Protein of unknown function. | 0.459 |
SFG04414.1 | SFG27540.1 | SAMN05518801_10684 | SAMN05518801_11346 | Outer membrane protein. | Sulfotransferase family protein. | 0.547 |
page 1 of 2