STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG35688.1Prolyl oligopeptidase family protein. (768 aa)    
Predicted Functional Partners:
SFF72809.1
Phosphocarrier protein HPr.
    
 
 0.818
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.736
SFG35674.1
TonB-dependent Receptor Plug Domain.
 
     0.641
SFF72903.1
Alpha-1,2-mannosidase, putative.
  
     0.619
SFG35945.1
N-terminal domain of tricorn protease-containing protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.592
SFG08146.1
Alpha-1,2-mannosidase, putative.
  
     0.567
SFG08129.1
Alpha-1,2-mannosidase, putative.
  
     0.558
SFF72925.1
alpha-L-fucosidase.
  
     0.556
SFF90748.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
    0.513
SFF85475.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.497
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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