STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG37138.1Conjugal transfer mating pair stabilization protein TraG. (1254 aa)    
Predicted Functional Partners:
SFG37121.1
Conjugative transfer pilus assembly protein TraH.
 
   
 0.829
SFG01843.1
Predicted nucleotidyltransferase.
  
     0.679
SFG37109.1
Hypothetical protein.
       0.623
SFG18814.1
DNA-binding prophage protein.
  
     0.560
SFF74371.1
Curli biogenesis system outer membrane secretion channel CsgG.
  
     0.546
SFG52844.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
  
     0.462
SFG38732.1
Hypothetical protein.
  
     0.419
SFG37074.1
Predicted nucleic-acid-binding protein, contains PIN domain.
       0.410
SFG37094.1
Transcriptional regulator, AbrB family.
       0.410
SFG32792.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.