STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG37501.1Transcriptional regulator, TetR family. (224 aa)    
Predicted Functional Partners:
SFG01021.1
Transcriptional regulator, TetR family.
  
     0.772
SFG53913.1
Transcriptional regulator, TetR family.
  
     0.712
SFG46909.1
Transcriptional regulator, TetR family.
  
     0.693
SFG00992.1
Transcriptional regulator, TetR family.
  
     0.678
SFG45020.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.667
SFF76931.1
Transcriptional regulator, TetR family.
  
     0.646
SFF96718.1
Transcriptional regulator, TetR family.
  
     0.640
SFF99024.1
Transcriptional regulator, TetR family.
  
     0.634
SFG37538.1
Luciferase family oxidoreductase, group 1.
       0.625
SFF91669.1
Transcriptional regulator, TetR family.
  
     0.623
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.