STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG41709.1Predicted arabinose efflux permease, MFS family. (437 aa)    
Predicted Functional Partners:
SFF73289.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.773
SFG41697.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase/cardiolipin synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.696
SFG31065.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.690
SFF73775.1
Acyl carrier protein.
 
  0.643
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.619
SFG04525.1
methylmalonyl-CoA mutase.
    
 0.541
SFF73418.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
  
 
  0.510
SFG16743.1
Iron-containing redox enzyme.
  
 
  0.505
SFG29324.1
Amino acid adenylation domain-containing protein.
  
  0.481
SFF75590.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.464
Your Current Organism:
Novosphingobium sp. CF614
NCBI taxonomy Id: 1884364
Other names: N. sp. CF614
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