STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER14748.1DNA repair protein radc. (127 aa)    
Predicted Functional Partners:
SEQ52271.1
comF family protein.
 
    0.685
SER75365.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
  
 0.664
SES14742.1
Rod shape-determining protein MreC.
  
  
 0.639
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
   
 0.619
SER49974.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.616
SEQ67958.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
    0.599
SER14689.1
PIN domain nuclease, a component of toxin-antitoxin system (PIN domain).
       0.574
SER14719.1
Looped-hinge helix DNA binding domain-containing protein, AbrB family.
       0.574
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
   
 0.569
SER33706.1
Cellulose synthase (UDP-forming).
  
    0.562
Your Current Organism:
Sphingobium sp. YR768
NCBI taxonomy Id: 1884365
Other names: S. sp. YR768
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.