STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD09086.1Pregnancy-associated plasma protein-A. (327 aa)    
Predicted Functional Partners:
SFD56330.1
Signal transduction histidine kinase.
   
 0.772
SFD63263.1
Hypothetical protein.
    
 0.679
SFE85525.1
Signal transduction histidine kinase.
    
 0.679
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.662
SFD09104.1
Hypothetical protein.
       0.613
SFE29225.1
Protein phosphatase 2C.
  
 0.579
SFF05686.1
Hypothetical protein.
  
 0.579
SFE54213.1
Signal transduction histidine kinase.
   
 0.540
SFD27186.1
Signal transduction histidine kinase.
   
 0.532
SFD82527.1
Response regulator receiver protein.
  
 0.531
Your Current Organism:
Chitinophaga sp. CF118
NCBI taxonomy Id: 1884367
Other names: C. sp. CF118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.