STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD77100.1Hypothetical protein. (801 aa)    
Predicted Functional Partners:
SFD77074.1
Predicted metalloprotease, contains C-terminal PDZ domain.
       0.773
SFD03543.1
alpha-N-arabinofuranosidase.
 
     0.726
SFD77051.1
Phosphoribosyl 1,2-cyclic phosphodiesterase.
       0.575
SFD61628.1
Alpha-L-arabinofuranosidase C-terminus.
 
     0.553
SFD77122.1
23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.530
SFD50047.1
Beta-galactosidase.
  
     0.499
SFE51575.1
alpha-L-rhamnosidase.
 
     0.477
SFD09381.1
alpha-L-fucosidase.
  
     0.473
SFE16776.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
 
     0.470
SFD77026.1
Acyl-CoA hydrolase.
       0.445
Your Current Organism:
Chitinophaga sp. CF118
NCBI taxonomy Id: 1884367
Other names: C. sp. CF118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.