STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD87859.1Regulatory protein, luxR family. (616 aa)    
Predicted Functional Partners:
SFD22668.1
SusD family protein.
  
     0.726
SFD54814.1
Hypothetical protein.
  
     0.716
SFE46630.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.712
SFE61152.1
Uncharacterized protein YwqG.
  
     0.698
SFF09454.1
Hypothetical protein.
  
     0.683
SFE27414.1
Methyltransferase domain-containing protein.
  
     0.667
SFD54788.1
Hypothetical protein.
  
     0.649
SFD22693.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.621
SFD32538.1
Hypothetical protein.
  
     0.613
SFD87793.1
BAAT / Acyl-CoA thioester hydrolase C terminal.
  
     0.546
Your Current Organism:
Chitinophaga sp. CF118
NCBI taxonomy Id: 1884367
Other names: C. sp. CF118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.