STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF99335.1Protein of unknown function. (713 aa)    
Predicted Functional Partners:
SFG70408.1
Polyhydroxyalkanoate synthase.
 
  
 0.782
SFG01112.1
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.742
SFG63171.1
Polyhydroxyalkanoate synthase.
 
  
 0.732
SFG01925.1
Short chain enoyl-CoA hydratase.
     
 0.701
SFG18217.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.701
SFG69748.1
Short chain enoyl-CoA hydratase.
     
 0.701
SFF77675.1
Hypothetical protein.
   
 
  0.681
SFG25557.1
NTE family protein.
 
   
 0.679
SFF99356.1
Protein of unknown function.
       0.580
SFG10181.1
itaconyl-CoA hydratase.
    
 0.537
Your Current Organism:
Duganella sp. CF458
NCBI taxonomy Id: 1884368
Other names: D. sp. CF458
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.