STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI62775.1Outer membrane immunogenic protein. (186 aa)    
Predicted Functional Partners:
SEJ89705.1
Cholesterol transport system auxiliary component.
  
     0.706
SEI76136.1
Tetratricopeptide repeat-containing protein.
  
     0.696
SEJ39887.1
Conserved hypothetical protein.
  
     0.693
SEJ04582.1
Ferrous iron transport protein A.
  
     0.689
SEJ56199.1
Tetratricopeptide repeat-containing protein.
  
     0.660
SEI80878.1
Periplasmic chaperone for outer membrane proteins Skp.
    
 
 0.647
SEI75263.1
Sporulation related domain-containing protein.
  
     0.643
SEJ59661.1
Hypothetical protein.
  
     0.643
SEJ69016.1
Hypothetical protein.
  
     0.643
SEI62517.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
     0.642
Your Current Organism:
Sphingobium sp. AP50
NCBI taxonomy Id: 1884369
Other names: S. sp. AP50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.