STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ05962.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
SEJ05991.1
Hypothetical protein.
      
0.822
SEJ06044.1
Phage shock protein B.
       0.764
SEJ06070.1
Phage shock protein A (PspA) family protein.
       0.764
SEJ05905.1
Hypothetical protein.
       0.688
SEJ06016.1
Phage shock protein C (PspC) family protein.
       0.675
SEJ05936.1
Hypothetical protein.
       0.605
SEJ06094.1
Hypothetical protein.
       0.439
SEJ06125.1
Psp operon transcriptional activator.
       0.417
Your Current Organism:
Sphingobium sp. AP50
NCBI taxonomy Id: 1884369
Other names: S. sp. AP50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.