STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ60837.1ATP-binding cassette, subfamily C, LapB. (717 aa)    
Predicted Functional Partners:
SEJ60822.1
Membrane fusion protein, adhesin transport system.
 0.990
SEJ60849.1
Outer membrane protein, adhesin transport system.
 
 0.963
SEJ70892.1
Membrane fusion protein, adhesin transport system.
 0.959
SEJ00267.1
Membrane fusion protein, adhesin transport system.
 0.956
SEI79252.1
ATP-binding cassette, subfamily B.
 
 
 
0.949
SEI65552.1
ATP-binding cassette, subfamily B.
 
 
 
0.946
SEJ60867.1
VCBS repeat-containing protein.
 
 
 0.858
SEJ60808.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
 
     0.856
SEJ70929.1
Outer membrane protein, adhesin transport system.
 
 0.847
SEJ32200.1
Outer membrane protein.
  
 
 0.812
Your Current Organism:
Sphingobium sp. AP50
NCBI taxonomy Id: 1884369
Other names: S. sp. AP50
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.