STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ93281.1Phosphate-selective porin OprO and OprP. (491 aa)    
Predicted Functional Partners:
SEJ93272.1
iron(III) transport system substrate-binding protein.
 
     0.880
SEJ93289.1
citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family.
 
     0.768
SEI83094.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.743
SEJ56099.1
Glycosyl transferase family 21.
  
     0.742
SEJ80808.1
Superfamily II DNA or RNA helicase.
  
     0.740
SEJ93298.1
Hypothetical protein.
 
     0.734
SEJ31943.1
Acyltransferase family protein.
  
     0.733
SEJ93067.1
Ca2+-binding protein, EF-hand superfamily.
  
     0.722
SEJ76823.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
  
     0.708
SEI65578.1
Methyltransferase domain-containing protein.
  
     0.703
Your Current Organism:
Sphingobium sp. AP50
NCBI taxonomy Id: 1884369
Other names: S. sp. AP50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.