STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI95870.1Protein N-acetyltransferase, RimJ/RimL family. (166 aa)    
Predicted Functional Partners:
SFI83571.1
Uncharacterized conserved protein YbbK, DUF523 family.
  
  
 0.759
SFJ99644.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase.
    
  0.700
SFJ32829.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.682
SFK15071.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.682
SFJ43949.1
IMP dehydrogenase.
   
  0.667
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.667
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
  0.554
SFJ24145.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
 
  0.514
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.509
SFI95904.1
Transcriptional regulator, MarR family.
       0.455
Your Current Organism:
Brevibacillus sp. OK042
NCBI taxonomy Id: 1884381
Other names: B. sp. OK042
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