STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ99389.1Transcriptional regulator, HxlR family. (106 aa)    
Predicted Functional Partners:
SFI73706.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes.
   
    0.582
SFK25460.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.536
SFJ99364.1
Site-specific DNA recombinase.
  
    0.530
SFJ99336.1
Trypsin-like peptidase domain-containing protein.
       0.512
SFJ99412.1
YheC/D like ATP-grasp.
       0.472
Your Current Organism:
Brevibacillus sp. OK042
NCBI taxonomy Id: 1884381
Other names: B. sp. OK042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.