STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL03425.1DDE superfamily endonuclease. (452 aa)    
Predicted Functional Partners:
SFJ66276.1
Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
  
 0.952
SFK29843.1
Protein of unknown function.
  
    0.871
SFJ56955.1
Hypothetical protein.
   
    0.812
SFJ41133.1
5-deoxyglucuronate isomerase.
   
    0.804
SFJ76379.1
Type I restriction enzyme M protein.
   
    0.571
SFK92104.1
Coat F domain-containing protein.
  
     0.419
Your Current Organism:
Brevibacillus sp. OK042
NCBI taxonomy Id: 1884381
Other names: B. sp. OK042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.