STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ04329.1Homoserine O-acetyltransferase. (373 aa)    
Predicted Functional Partners:
SDZ04299.1
Methionine biosynthesis protein MetW.
  
 0.998
SDZ52221.1
O-acetylhomoserine sulfhydrylase.
 
 
 0.986
SDY79271.1
O-acetylhomoserine sulfhydrylase.
 
 
 0.967
SDZ54863.1
Homoserine dehydrogenase.
 
 0.959
SDZ51580.1
O-succinylhomoserine sulfhydrylase.
 
  
 0.942
SDZ35035.1
Serine hydroxymethyltransferase.
     
 0.926
SDY27123.1
Threonine dehydratase.
  
 
 0.921
SDZ68742.1
Threonine dehydratase.
  
 
 0.921
SDZ32236.1
Phosphoserine phosphatase.
     
 0.919
SDY11087.1
Tryptophan synthase beta chain.
     
 0.917
Your Current Organism:
Variovorax sp. YR266
NCBI taxonomy Id: 1884386
Other names: V. sp. YR266
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.