STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP35364.1Transketolase. (61 aa)    
Predicted Functional Partners:
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 0.906
SFQ06618.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.884
SFO90400.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.850
SFQ07878.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase.
  
 
 0.843
SFP31180.1
PTS system, sucrose-specific IIC component.
   
 
 0.831
SFP80361.1
PTS system, D-glucosamine-specific IIC component.
   
 
 0.831
SFP35330.1
Fructose-1,6-bisphosphatase II.
    
 0.829
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.806
SFP35042.1
Ribose 5-phosphate isomerase B.
  
 
 0.801
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.796
Your Current Organism:
Salibacterium halotolerans
NCBI taxonomy Id: 1884432
Other names: Bacillus sp. IB5, Bacillus sp. S7(2015), CGMCC 1.15324, KCTC 33658, S. halotolerans, Salibacterium halotolerans Reddy et al. 2015, strain S7
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